Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGYLHDAFSLKGKTALVTGPGTGIGQGIAKALAGAGADIIGTS-HTSSLSETQQLVEQEGRIFTSFTLDMSKPEAIKDSAAEL-FENRQIDILVNNAGIIHREKAEDFPEENWQHVLNVNLNSLFILTQLAGRHMLKRGHG-KIINIASLLSFQGGILVPAYTASKHAVAGLTKSFANEWAASGIQVNAIAPGYISTANTKPIRDDEKRNEDILKRIPAGRWGQADDIGGTAVFLASRASDYVNGHILAVDGGWLSR
4G81 Chain:C ((5-253))-------FDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKASDYINGQIIYVDGGWLA-


General information:
TITO was launched using:
RESULT:

Template: 4G81.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1312 -31022 -23.64 -126.10
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain C : 0.82

3D Compatibility (PKB) : -23.64
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.608

(partial model without unconserved sides chains):
PDB file : Tito_4G81.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4G81-query.scw
PDB file : Tito_Scwrl_4G81.pdb: