Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTATIIDGKETAREKREQLAKEVEELKKQ--GVTPGLAVILIGDDPASHSYVRGKKKAAETMGM-NFKLDQFDSSLTEAELLSIIDQYNQDPEFHGILVQLPLPDHISEKAVIERISPDKDVDGFHPLNVGKMLLGED--TFLPCTPHGIVELLKKTNIDLSGKEVVVVGRSNIVGKPVGQLLLNENATVTYCHSRTE--NITEHTKKADILVVAVGRANFISADQIKEGAVVIDVGV------NRLENGKLCGDVEFEGAKEKASFITPVPGGVGPMTITMLAHNTVKSAKRTLS
4CJX Chain:B ((25-316))--AVVIDGRAVAKAIQKELTEEVALLERRYKGRRPGLSTIICGKRKDSQTYVRLKRKAAAACGFRNFSV-ELPANVTQEALEREVIRLNEEEACHSIVVQLPLPPHIDKVAALSKIKPEKDADCLLPVNVGQLHIRERNPAIVPCTASAVMELLRCSGVEICGKRVVVLGRGDIAGLPVATLLANEDATVTVVHSATPLCDIADIVRASDIVVSAAGQPGLVRGEWIKLGAAVIDVGTTPVADPSKVPGYRLVGDVCFDVARKRAAYITPVPGGVGPVTVSMLLKNTLTMFKRSV-


General information:
TITO was launched using:
RESULT:

Template: 4CJX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1504 -29741 -19.77 -106.60
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain B : 0.83

3D Compatibility (PKB) : -19.77
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.676

(partial model without unconserved sides chains):
PDB file : Tito_4CJX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4CJX-query.scw
PDB file : Tito_Scwrl_4CJX.pdb: