Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEVKEQLKLKELLFIMKQMPKTFKLIFTLERSLFLKLIRFSIITGILPIVSLYISQELINSLVTIRKEVSIVITIFLTYLGVSFFSELISQISEFYNGKFQL----NIGYKLNYKVMKKSSNLALKDFENPEIYDKLERVTKEISYKPYQIIQAIITMTTSFVTLLSSIAFLMSWNPKVSLLLL-VIPVISLFYFLKIGQEEFFIHWKRAGKERKSWYISYILTHDFS-FKELKLYNLKDYLLNKYWDIKKSFIEQDTK------ILRKKTLLNLIYEIAVQLV---GAVIIFIAIMSAFAGKIMVGNVMSYIRSVSLVQNHSQSIMTSIYSIYNSNLYMNQLYEFLELKEEKSQGHKKPIVEPIHSVVFQNVSFIYPNQGEQTLKHINVSLHKGERVAIVGPNGSGKKTFIKLLTGLYEVHEGDILINGINIKELDMDSYMNQIAALFQDFMKYEMTLKENIGFGQIDKLHQTNKMHEVLDIVRADFLKSHSSYQFDTQLGLWFDEGRQLSGGQWQKIALARAYFREASLYILDEPSSALDPIAEKETFDTFFSLSKDKIGIFISHRLVAAKLADRIIVMDKGEIVGIGTHEELLKTCPLYKKMDESENYMNPLEEEGSKWKEALYQG
4Q4H Chain:B ((25-590))--------LRRLLGYLR--PHTFTLIMVFV---------FVTVSSILGVLSPYLIGKTIDVVFVPRR--FDLLPRYMLILGTIY---ALTSLLFWLQGKIMLTLSQDVVFRLRKELFEKLQRVPVGFFDRTPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVNVILSLVTLSIVPLTVLITQIVSSQTRKYFYEN----QRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKAQIFSGVL--PPLMNMVNNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALAS-------AERIFEILDLEEEKDDPDAVELREVRGEIEFKNVWFSY-DKKKPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGIDIRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDE--EIKEAAKLTHSDHFIKHLPEGYETVLT---DNGEDLSQGQRQLLAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGKHDELIQKRGFYYELFTSQ--------------------


General information:
TITO was launched using:
RESULT:

Template: 4Q4H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 2195 -51601 -23.51 -93.65
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain B : 0.76

3D Compatibility (PKB) : -23.51
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.313

(partial model without unconserved sides chains):
PDB file : Tito_4Q4H.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4Q4H-query.scw
PDB file : Tito_Scwrl_4Q4H.pdb: