Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRHALITAGSKGLGRKVTETLLAKGYSVTVNYRQDEEAVSRLKEACPDCLDRLQFVKGDVTKKEDLLRIAEAALNRFGRIDFLINNAGPYIFERKKLADYTDDEWYGMLEGNLSAVFHLFKAVIPIMRKQQFGRIITYGFQGAAHAPGWLHRSAFGAAKVGLASLTKTIAIEEAEFGITANMVCPGDIVGDMKEASIEEARMRIGKEKTPIGRSGTGEDIARIIAFLCEENSDLVTGTVIEATGGLNVINKNQTT
3GK3 Chain:C ((26-268))-RVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFGKVDVLINNAG--ITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSR--GAFGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMV---------AKILPQIPVGRLGRPDEVAALIAFLCSDDAGFVTGADLAINGGMHM-------


General information:
TITO was launched using:
RESULT:

Template: 3GK3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1283 -117989 -91.96 -504.23
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain C : 0.79

3D Compatibility (PKB) : -91.96
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.500

(partial model without unconserved sides chains):
PDB file : Tito_3GK3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GK3-query.scw
PDB file : Tito_Scwrl_3GK3.pdb: