Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNHSKTLLLTAAAGLMLTCGAVSSQAKHKLSDPYHFTVNAAAETEPVDTAGDAADDPAIWLDPKTPQNSKLITTNKKSGLVVYSLDGKMLHSYNTGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEEDE-AIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFRITDGPETDGTSDTDGIDVLGFGLGPEYPFGIFVAQDGENIDHGQKANQNFKIVPWERIADQIGFRPLANEQVDPRKLTDRSGK
3M0C Chain:C ((558-632))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN--RKTILED---EKRLAHPFSLAVF-----EDKVFWTDIINEAIFSANRLT--------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3M0C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 341 -5544 -16.26 -74.92
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain C : 0.58

3D Compatibility (PKB) : -16.26
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.404

(partial model without unconserved sides chains):
PDB file : Tito_3M0C.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3M0C-query.scw
PDB file : Tito_Scwrl_3M0C.pdb: