Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNSFRFTKMHGLGNSYIYVNQFEEQLPEEKLSEIAIQVSSVYTGIGSDGMILICPS-DQAPVKMRIFNNDGSEGKNCGNGLRCVAKYAYE-HKLVEETSFLIETLSGLVKAEVQVENGKVNVVTVDMGEPRLTKSELPM-LDGGE-EHTINETMAFGEVELTGTAVSMGNPH-IVF-----PIADIEQAPLTTLGPVIEKDPRFPEGINVEFVETVNEQELHFRVWERGSGITQACGTGACAAAVASVLNGVSKRNQDITVHLAGGDLVINWK-DNGHVMMTGPAETVCEGVYFL
3EJX Chain:B ((27-311))---LHFVKYHGLGNDFILVDNRDSSEPK-ITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGKHSFTIHTGAGLIVPEIQ-DDGQVKV---DMGTPILKAQDVPTKLSGNKGEAVVEAELVVDGVSWNVTCVSMGNPHCITFGKKGGPNLKVDDLNLPEIGPKFEHHEMFPARTNTEFVEVLSRSHLKMRVWERGAGATLACGTGACALVVAAVLEGRADRK--CTVDLPGGPLEIEWKQEDNHIYMTGPAEAVFYGSALL


General information:
TITO was launched using:
RESULT:

Template: 3EJX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1759 -20885 -11.87 -76.22
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain B : 0.81

3D Compatibility (PKB) : -11.87
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.471

(partial model without unconserved sides chains):
PDB file : Tito_3EJX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3EJX-query.scw
PDB file : Tito_Scwrl_3EJX.pdb: