Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGKLLTMAMPKGRIFEEAAGLLRQAGYRLPEEFEDSRKLIIDVPEENLRFILAKPMDVTTYVEHGVADVGIAGKDVMLEEERDVYEVLDLNISKCHLAVAGLPNTDWSGVAPRIATKYPNVASSYFREQGEQVEIIKLNGSIELAPLIGLADRIVDIVSTGQTLKENGLVETEHICDITSRFIVNPVSYRMKDDVIDEMASRLSLVVEGETAK
1USY Chain:E ((1-202))---MLKLAIPKGRLEEKVMTYLKKTGVIFERESSILRE------GKDIVCFMVRPFDVPTYLVHGVADIGFCGTDVLLEKETSLIQPFFIPTNISRMVLAGPKGRGIPEGEKRIATKFPNVTQRYCESKGWHCRIIPLKGSVELAPIAGLSDLIVDITETGRTLKENNLEILDEIFVIRTHVVVNPVSYRTKREEVVSFLEKLQEVIEHDS--


General information:
TITO was launched using:
RESULT:

Template: 1USY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 990 -128778 -130.08 -637.51
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain E : 0.79

3D Compatibility (PKB) : -130.08
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.413

(partial model without unconserved sides chains):
PDB file : Tito_1USY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1USY-query.scw
PDB file : Tito_Scwrl_1USY.pdb: