Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKVITYGTFDLLHWGHIKLLERAKQL--GDYLVVAISTDE-------FNLQKQKKAYHSYEHRKLILETIRYVDEVIPEKNWEQKKQDIIDHNIDVFVMGDD----WEGKFDFLKDQCEV-VYLP--RTEGISTTKIKEEIAGL
4MVD Chain:E ((98-229))--RVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENERYDAVQH-------CRYVDEVVRNAPWTLTPEFLAEHRID-FVAHDDIPYSSAGSDDVYKHIKEAGMFAPTQRTEGISTSDI-------


General information:
TITO was launched using:
RESULT:

Template: 4MVD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 481 -6308 -13.11 -56.32
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain E : 0.75

3D Compatibility (PKB) : -13.11
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.491

(partial model without unconserved sides chains):
PDB file : Tito_4MVD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MVD-query.scw
PDB file : Tito_Scwrl_4MVD.pdb: