Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKAVSVILTLSLFLLTACSLEPPQWAKPSNSGNKKEFTIGLSVSTLNNPFFVSLKKGIEKEAKKRGMKVIIVDAQNDSSKQTSDVEDLIQQGVDALLINPTDSSAISTAVESANAVGVPVVTIDRSAE-QGKVETLVASDNVKGGEMAAAFIADKLG-KGAKVAELEGVPGASATRERGSG---------FHNIADQKLQVVTKQSADFDRTKGLTVMENLLQGHPDIQAVFAHNDEMALGALEAINSSGKD--ILVIGFDGNKDALASIKDRKLSATVAQQPELIGKLATEAADDILHG--KKVQK-TISAPLKLETQK
4RY9 Chain:A ((8-284))-------------------------------------FKIGVSMKTLSAPYFAAQMEAAKARGKELGYEVLATDAQGKLQKQISDVEDLVTRGVKLLIINPADSEGLVNAVNNASANGVKVVVIDSTLNPRANFVTQVQSSNSINGALVGHWVIEEVGNKSLKIALLSGEKGNPVGQERRLGVLSGIIEAQLRKFGKADLTVVGQGWGHWNDEGGLKAMEDLLVANKDINMVLGENDSMVLGARRAIESAGRTGILLVAAADAQKEALALIKQGKYGVTGLNDPALVARTAIDLGVKVVKGEVKDVPKQTLTTP-------


General information:
TITO was launched using:
RESULT:

Template: 4RY9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1530 16653 10.88 63.80
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : 10.88
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.571

(partial model without unconserved sides chains):
PDB file : Tito_4RY9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RY9-query.scw
PDB file : Tito_Scwrl_4RY9.pdb: