Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MNKVNQILEEKVMPIAGRIAGQRHLQALRDGIILTMPLIIIGSFFLIIGNLPIPGYAEFMAKTFGSSWSEKLAYPVDATFEIMGLVAAFGIAYRLAEKYGVDALSAGAISLAAFLLATPYQVPFMPDGATKEIMVGGGIPLSLMGSKGLFVA-MIIAMVSTEIYRLIIQ--RNLVFKMPDGVPPAVSKSFVALIPGFAVIFLIWAARLIVEATPFESLHNIVSVLLGTPLSILGGSLGGSLVAEAVKMLLWACGLHGANIVGGVMAPIWYGAMDANRIAFQAGEELPKIFTQQFFDIWVNIGGSGATLALVVTMFLRARSKQMKQLGKLAVGPAIFNINEPIIFGMPIVMNPMLLLPFIITPLVTVTLTYIGMSTGLVAKPAGIAVPWTM---PPIFSGYLATGGKVSGAVMQAINIAVSFVVYYPFFRMWDKQKLKEENDLELVQTPAATDDKEAAL 1IQ8 Chain:A ((6-340)) -KMLKFEIKARD-------------GAGRIGKLEVNGKKIETPAIMPVVN------------------PKQM-VVEPKELEKMGFEIIITNSYIIYKDEELRRKALEL-GIHRML---DYNGIIEVDSGSFQLMKY----------------GS-IEVSNREIIEFQHRIGVDIGTFLDIPTPPDAPREQAVKELEITLSRAREAEEIKE--------IPMNATIQG--------STYTDLRRYAARRLSSM-NFEIHPIGGVVPLLESYRFRDVVDIVISSKMALRP-------DRPVHLFGAGHPIVFALAVAM---------------GVDLFDSASYALYAKD---------DRYMTPEGTKRLDELD-----YFPC---SCPVCSKYTPQELREMPK---EERTRLLALHNLWVIKEEIKRVKQAIKEGELWRLVDERARSHP----------

General information: TITO was launched using: RESULT: Template: 1IQ8.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1890 -96160 -50.88 -292.28 target 2D structure prediction score : 0.49 Monomeric hydrophicity matching model chain A : 0.57 3D Compatibility (PKB) : -50.88 2D Compatibility (Sec. Struct. Predict.) : 0.49 1D Compatibility (Hydrophobicity) : 0.57 QMean score : 0.279

(partial model without unconserved sides chains): PDB file : Tito_1IQ8.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1IQ8-query.scw PDB file : Tito_Scwrl_1IQ8.pdb: