Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDANPAFDTVHPSGHILVRSCRGGYMHSVSLSEAAMETDAETLAEAILLTADVSCLKALLEVRNEIVAAGHTPSAQVPTTDDLNVAIEKLLAHQLRRRNR
2JO1 Chain:A ((1-72))
----------------------------ESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVLSRRCRCKFNQQQRTGEPDEEEGTFRSSIRRLSTRRR-
General information:
TITO was launched using:
RESULT:
Template:
2JO1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6850 for 334 contacts (20.5/contact) +
2D Compatibility (PS) -7617 + (NN) -6392 + (LL) 1200
1D Compatibility (HY) -1600 + (ID) 450
Total energy: -8009.0 ( -23.98 by residue)
QMean score : 0.215
(partial model without unconserved sides chains):
PDB file :
Tito_2JO1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JO1-query.scw
PDB file :
Tito_Scwrl_2JO1.pdb
: