Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDDADLDLVRRTF-AAFARGDLAELTQCFAPDVE-QFVPGKHALAGVFRGVDNVVACLGDTAAAADGTMTVTLEDVLSNTDGQVIAVYRLRAS---------RAGKVLDQREAILVTVAGGRITRLSEFYADPAATESFWA
3F9S Chain:A ((3-140))
SISSKAKEILTQFTREVWSEGNIEASDKYIAPKYTVLHDPGD-PWEGRELDVAGYKERVKTLRAAFP-DQCFDIQGLFADG-DAVVMTWLWTATHKEDIPGFPSTGKQIKMSGATVYYFDGNRLTGHWQITDRLGVYQQLR-
General information:
TITO was launched using:
RESULT:
Template:
3F9S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72263 for 900 contacts (-80.3/contact) +
2D Compatibility (PS) -13529 + (NN) -4332 + (LL) -60
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -94634.0 ( -105.15 by residue)
QMean score : 0.474
(partial model without unconserved sides chains):
PDB file :
Tito_3F9S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F9S-query.scw
PDB file :
Tito_Scwrl_3F9S.pdb
: