Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKWLGAPLARGVSTATRAKDSDRQDACRILDDALRDGELSMEEHR-ERVSAA-TKAVTLGDLQRLVADLQVESAPAQMPALKSRAKRTELGLLA-------AAFVASVLLGVGIGWGVYGNTRSPLDFTSDPGAKPDGIAPVVLTPPRQLHSLGGLTGLLEQTRKRFGDTMGYRLVIYPEYASLDRVDPADDRRVLA-YTYRGGWGDATSSAKSIADVSVVDLSKFDAKTAVGIMRGAPETLGLKQSDVKSMYLIVEPVKDPTTPAALSLSLYV-SSDYGGG-YLVFAGDGTIKHVSYPS
3LLM Chain:A ((1-235))VVPWSPPQSNWNPWTSSNIDEGPLAFA-------------TPEQISMDLKNELMYQLEQDHDLQAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQ--------------NDRAAE----CNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSV-------RFESILPRPHA--SIMFCTVGVLLRKLEAGIRGISHVIVD------------------EIHERDINTDFLLVVLRDVVQAYPE----VRIVLMSATIDTSMFCEYFFNCPIIEV----


General information:
TITO was launched using:
RESULT:

Template: 3LLM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34859 for 1738 contacts (-20.1/contact) +
2D Compatibility (PS) -23522 + (NN) -9693 + (LL) 3388
1D Compatibility (HY) -10400 + (ID) 1350
Total energy: -76436.0 ( -43.98 by residue)
QMean score : 0.331

(partial model without unconserved sides chains):
PDB file : Tito_3LLM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3LLM-query.scw
PDB file : Tito_Scwrl_3LLM.pdb: