Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----------------------------------------------------------------------------------------------------------------------------------------------------MDYTLRRRSLLAEVY--SGRTGVSEVCD--ANPYLLRAAKFHGKPSRVICPICRKEQLTLVSWVFGEHLGAVSGSARTAEELILLATRFSEFAVHVVEVCRTCSWNHLVKSYVLGAARPARPPRGSGGTRTARNGARTASE-------------------------------------------------------------------------- |
4WID Chain:A ((10-362)) | KDMALQHAVDLLEKMLADEEKLTEFNLGDPLFESANDDPIKTLEEIIQEGDDVVGAHQLVVTQIKLRVQRNRRLADEIIREQLTDIRKVFSDKFEKLEQGIQNSYLLLDKLKTPFQDMRCLFEVANEQFNDTPVPPQYKEFMVCLKQIVQYAVNSSSLEKFVMLITKKDDIKDRVTYTCMKYLLMAMQGTGGPKAI-----NNEEHAKLFFQLSNYDDLTDANHDGLELIKKLDKEQKEVAFHVNN------FTHLVTTLGMALYK-----EGHQKNDEAMLGMHTPITMLSDQVRVLILYLIDEIVHAIHTNSNQSNDELIDGLKPKVRIVINEFHATLMMGIDKMKFYSLNELREIVNDKI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WID.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1786 for 615 contacts (-2.9/contact) +
2D Compatibility (PS) -12418 + (NN) 694 + (LL) 632
1D Compatibility (HY) -4800 + (ID) 1200
Total energy: -18878.0 ( -30.70 by residue)
QMean score : 0.159
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