Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDECVVDAAAVVDALAGKGASAIVLRGLLKESISNAPHLLDAEVGHALRRAVLSDEISEEQARAALDALPY---L-IDNRYPHSPRLIEYTWQL--RHNVTFYDALYVALATALDVPLLTGDSRLAAAPGLPCEIKLVR
3I8O Chain:A ((3-123))
AKKVCVDTCVVIDGRITELIER----GKLKDATIIIPEAVVSELEYQANMGREIGY----KGIEELRKLIEKASEHNIKVEYYGE---RPTREEIFLAKSGEIDAMIRKVAKETNSILLTSDWIQYNLAKAQ-------
General information:
TITO was launched using:
RESULT:
Template:
3I8O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40044 for 846 contacts (-47.3/contact) +
2D Compatibility (PS) -12579 + (NN) -2944 + (LL) 2432
1D Compatibility (HY) 2400 + (ID) 950
Total energy: -51685.0 ( -61.09 by residue)
QMean score : 0.234
(partial model without unconserved sides chains):
PDB file :
Tito_3I8O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3I8O-query.scw
PDB file :
Tito_Scwrl_3I8O.pdb
: