Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MLFAALRDMQWRKRRLVITIISTGLIFGMTLVLTGLANGFRVEARHTVDSMGVDVFVVRSGAAGPFLGSIPFPDVDLARVAAEPGVMAAAPLGSVGTIMKEGTSTRNVTVFGAPEHGPGMPRVSEGRSPSKPDEVAASSTMGRHLGDTVEVGARRLRVVGIVPNSTALA-KIPNVFLTTEGLQKLAYNGQPNITSIGII----GMPRQLPEGYQTFDRVGAVNDLVRPLKVAVNSISIVAVLLWIVAVLIVGSVVYLSALERLRDFAVFKAIGTPTRSIMAGLALQALV-IALLAAVVGVVLAQVLAPLFPMIVAVP---VGAYLALPVAAIVIGLFASVAGLKRVVTVDPAQAFGGP |
| 4UX8 Chain:C ((25-343)) | DRLDCVKASDQCLKE--------------------QSCSTKYRTLRQCV------------AGKETNFSLTSGLEAKDECRSAMEAL---------------KQKSLYNCRCKRGMKKEKNCLRIYWSMYQSKGNNCLDAAKACN-----LDDTCKKYRSAYITPCTTSMSNEVCNRRKCHKALRQF-FDKVPAKHSYGMLFCSCRDIACTERRRQTIVPVCSYEERERPNCLSLQDSCKTN----------------YICRSRLADF--FTNCQPESRSVSNCLKENYADCLLAYSGLIGTVMTPNYVDSSSLSVAPWCDCSNSGNDLEDCLKFLNFFKDNTCLKNAI-----QAFGNG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UX8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87129 for 1966 contacts (-44.3/contact) +
2D Compatibility (PS) -29024 + (NN) -12329 + (LL) 7448
1D Compatibility (HY) -2000 + (ID) 2350
Total energy: -125384.0 ( -63.78 by residue)
QMean score : 0.135
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