Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------MEPKRSRLVVCAPEPSHAREFPDVAVF-SGGRANASQAERLARAVGRVLADRGVTGGARVRLTMANCADGPTLV---QINLQVGDTPLRAQAATAGIDDLRPALIRLDRQIVRASA-----------------QWCPR-----PWPDRPRRRLTTPAEALVTRR------------KPVVLRRATPLQAIAAMDAMDYDVHLFTDAETGE---------DAVVYRAGPSGLRLAR---------------QHHVFPPGWSRCRAPAGPPVPLIVNSRPT-PVLTEAAAVDRAREHGLPFLFFTDQATGRGQ--LLYSRYDGNLGLITPTGDGVADGLA--- |
| 5A7V Chain:A ((24-388)) | ASGQPSNDKKNVLPDWAFGGFERPQGANPVISPIENTKFYC-PMTQDYVAWESNDTFNPAATLHDGKIVVLYRAEDK---SGVGIGHRTSRLGYATSSDGIHFKREKTPVFYPDNDTQKKLEWPGGCEDPRIAVTAEGLYVMTYTQWNRHIPRLAIATSRNLKDWTKHGPAFAKAYDGKFFNLGCKSGSILTEVVNGKQVIKKIDGKYFMYWGEEHVFAATSEDLVNWTPYVNTDGSLRKLFSPRDGHFDSQLTECGPPAIYTPKGIVLLYNGKNSASRGDKRYTANVYAAGQALFDANDPTRFITRLDEPFFRPMDSFEKSGQYVDGTVFIEGMVYYKDKWYLYYGCADSKVGMAIYNPKKPAAADPLPA |
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General information:
TITO was launched using:
| RESULT:
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Template: 5A7V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -763 for 1998 contacts (-0.4/contact) +
2D Compatibility (PS) -26466 + (NN) 3190 + (LL) 656
1D Compatibility (HY) 9600 + (ID) 800
Total energy: -14583.0 ( -7.30 by residue)
QMean score : 0.072
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