Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSHTDLTPCTRVLASSGTVPIAEELLARVLEPYSCKGCRYLIDAQYSATEDSVLAYGNFTIGESAYIRSTGHFNAVELILCFN---------QLAYSAFAPAVLNEEIRVLRGWSIDDYCQHQLSSMLIRKASSRFRKPLNPQKFSARLLCRDLQVIERTWRYLKVPCVI----EFWDENGG---AASGEIELAALNIP---------------------------------------- |
2CVH Chain:A ((1-220)) | MLSTGTKSLDSLLGGG----FAPGVLTQVYGPYA------------SGKTTLALQTGLLSGKKVAYVDTEGGFSPERLVQMAETRGLNPEEALSRFILFTPSDFKEQRRVIG--SLKKTVDSNFALVVVDSITAHYRAEENRSGL-IAELSRQLQVLLWIARKHNIPVIVINQVHFDSRTEMTKPVAEQTLGYRCKDILRLDKLPKPGLRVAVLERHRFRPEGLMAYFRITERGIEDVE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CVH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93143 for 1231 contacts (-75.7/contact) +
2D Compatibility (PS) -16951 + (NN) -2335 + (LL) 744
1D Compatibility (HY) -9600 + (ID) 1700
Total energy: -122985.0 ( -99.91 by residue)
QMean score : 0.319
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