Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRTPVILVAGQDHT--DEVTGALLR-R----TGTVVVEHRFDG-HVVRRMTATLSRGELITTEDALEFAHGCVSCTIRDDLLVLLRRLHRRDNVGRIVVHLAPWLEPQ---PICWAIDHVRVCVGHGYPDGPAALDVRVAAVVTCVDCVRWLPQSLGEDELPDGRTVAQVTVGQAEFADLLVLTHPEPVAVAVLRRLAPRARITGGVDRVELALAHLDDNSRRGRTDTPHTPLLAGLPPLAADGEVAIVEFSARRPFHPQRLHAAVDLLLDGVVRTRGRLWLANRPDQVMWLESAGGGLRVASAGKWLAAMAASEVAYVDLERRLFADLMWVYPFGDRHTAMTVLVCGADPTDIVNALNAALLSDDEMASPQRWQSYVDPFGDWHDDPCHEMPDAAGEFSAHRNSGESR |
| 3KL4 Chain:A ((97-268)) | --PFIIMLVGVQGSGKTTTAGKLAYFYKKRGYKVGLVAADVYRPAAYDQLLQLGN----QIGVQVYGEPNNQNPIEIA---KKGVDIFV-KNKMDIIIVDTAGRHGYGEETKLLEEMKE-------------MYDVLKPDDVILVIDASIGQKAYD----------LASRF-HQASPIGSVIITKMD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3KL4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -100975 for 1104 contacts (-91.5/contact) +
2D Compatibility (PS) -15619 + (NN) -7644 + (LL) 14832
1D Compatibility (HY) -2000 + (ID) 750
Total energy: -112156.0 ( -101.59 by residue)
QMean score : 0.291
|
|
|