Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTPFDDPQAELAWMFLQSLCEGGDLDEGFALLSNDFTYWSIVT-------RTELDKKTFRRAVERRKQVF-EVNIELIRCVNEGETVVVEGHCDGVSADRTRYDSPFVCIFETRDGMIISLREYSDTQSLAEVYPVACATPGRC
3EBT Chain:A ((3-132))
-----SNNMQTVRESYEAFHR-RDLPGVLAALAPDVRWTHPDGMSPYGLGGTKHGHDEVIAFIRHVPTHIAEMRLAPDEFIESGERIVVLGTRRVTAVNGRSATLKFVHVWRFENGRAVTFEDHFDTAEMIRLITA--------
General information:
TITO was launched using:
RESULT:
Template:
3EBT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50187 for 818 contacts (-61.4/contact) +
2D Compatibility (PS) -13112 + (NN) -4681 + (LL) 244
1D Compatibility (HY) -2000 + (ID) 850
Total energy: -70586.0 ( -86.29 by residue)
QMean score : 0.496
(partial model without unconserved sides chains):
PDB file :
Tito_3EBT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EBT-query.scw
PDB file :
Tito_Scwrl_3EBT.pdb
: