Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTELDDVSSLPSSRRTAGDTWAITESVGATALGVAAARAVETAATNPLIRDEFAKVLVSSAGTAWARLADADLAWLDGDQLGRRVHRVACDYQAVRTHFFDEYFGAAVDAGVRQVVILAAGLDARAYRLNWPAGTVVYEIDQ-PSVLEYKAGILQSHGAVPTARRHAVAVDLRDDWPAALIAAGFDGTQPTAWLAEGLLPYLPGDAADRLFDMVTALSAPGSQVAVEAFTMNTKGNTQRWNRMRERLGLDIDVQA---LTYHEPDRSDAAQWLATHGWQVHSVSNREEMARLGRAIPQDLVDETVRTTLLRGRLVTPAQPA |
| 2P8J Chain:A ((22-180)) | -------------------------------------------------------------------------------------------------------------NLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSREN----NFKLNISKGDIRK-LP--FKD-----ESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTTKDERYNKG-EKIGEGEFLQLE-GEKVIHSYVSL--EEADKYFKDMKVLFKED-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2P8J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79811 for 1118 contacts (-71.4/contact) +
2D Compatibility (PS) -16197 + (NN) -3105 + (LL) 11308
1D Compatibility (HY) -4000 + (ID) 1000
Total energy: -92805.0 ( -83.01 by residue)
QMean score : 0.281
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