Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPIATPEVYAEMLGQAKQNSYAFPAINCTSSETVNAAIKGFADAGSDGIIQFSTGGAEFGSGLGVKD-MVTGAVALAEFTHVIAAKYPVNVALHTDHCPKDKLDSYVRPLLAISAQRVSKGGNPLFQSHMWDGSAVPIDENLAIAQELLKAAAAAKIILEIEIGVVGGEEDGVANE--INEKLYTSPEDFEKTIEALGAGEHGKYLLAATFGNVHGVYKPGNVKLRPDILAQGQQVAAAKLGLPADAKPFDFVFHGGSGSLKSEIEEALRYGVVKMNVDTDTQYAFTRPIAGHMFTNYDGVLKVDGEVG--------VKKVYDPRSYLKKAEASMSQRVVQACNDLHCAGKSLTH |
3QM3 Chain:B ((27-357)) | ---------------AKAEGFAIPAVNVVGTDSINAVLEAAKKVNSPVIIQFSNGGAKFYAGKNCPNGEVLGAISGAKHVHLLAKAYGVPVILHTDHAAR-KLLPWIDGLIEANAQYKKTHGQALFSSHMLDLSEESLEENLSTCEVYLQKLDALGVALEIELGCTGG------NTGIDNSKLYTQPEDVALAYERLGKISD-KFSIAASFGNVHGV-----VSLQPEILKNSQKFVKDKFALNSD-KPINFVFHGGSGSELKDIKNAVSYGVIKMNIDTDTQWAFWDGVREYELKNR---AYLQGQIGNPEGDDKPNKKYYDPRVWLRSGEESMIKRLEIAFEDLNCINKN--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QM3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138944 for 2604 contacts (-53.4/contact) +
2D Compatibility (PS) -33718 + (NN) -15186 + (LL) 1468
1D Compatibility (HY) -24000 + (ID) 6700
Total energy: -217080.0 ( -83.36 by residue)
QMean score : 0.491
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