Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------MALSIKHPEADRLARALAARTGE-------TLTEAVVT---------------------ALRERLARETGRARVVPLRDELAAIRHRCAALPVVDNRSAEAILGYDERGLPA----
2ABY Chain:A ((1-122))
MQKGLEIAFQTINGLDESLVQALAGVTASDFPDLDIKYNIFLVDLYGQKYFRILFQSKKLSELHPEERKKVREKFDENSRMQYSELMTKYHDLKKQGKIKDRPVKEVHEEYDLWEDPIWQYI
General information:
TITO was launched using:
RESULT:
Template:
2ABY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6131 for 453 contacts (-13.5/contact) +
2D Compatibility (PS) -9473 + (NN) -4634 + (LL) 0
1D Compatibility (HY) -2000 + (ID) 650
Total energy: -22888.0 ( -50.53 by residue)
QMean score : 0.466
(partial model without unconserved sides chains):
PDB file :
Tito_2ABY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ABY-query.scw
PDB file :
Tito_Scwrl_2ABY.pdb
: