Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVNDGVDQMGAEPDIMEFVEQMGGYFESRSLTRLAGRLLGWLLVCDPERQSSEELATALAASSGGISTNARMLIQFGFIERLAVAGDRRTYFRLRPNAFAAGERERIRAMAELQDLADVGLRALGDAPPQRSRRLREMRDLLAYMENVVSDALGRYSQRTGEDD
1LJ9 Chain:A ((12-99))
---------------ARALDSISNIEFKELSLTRGQYLYLVRVCE-NPG-IIQEKIAELIKVDRTTAARAIKRLEEQGFIYRQEDASNKKIKRIYATEKGKNVYP------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1LJ9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40728 for 600 contacts (-67.9/contact) +
2D Compatibility (PS) -9265 + (NN) -2677 + (LL) 4776
1D Compatibility (HY) 1600 + (ID) 750
Total energy: -47044.0 ( -78.41 by residue)
QMean score : 0.375
(partial model without unconserved sides chains):
PDB file :
Tito_1LJ9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1LJ9-query.scw
PDB file :
Tito_Scwrl_1LJ9.pdb
: