Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------MSSGAGSDATGAGGVHAAGSGDRAVAAAVERAKATAARNIPAFDD-------LPVPADTANLREGADLN------------NALLALLPLVGVWRGEGEGRGPDGDYRFGQQIVVSHDGGDYLNWESRSWRLTATGDYQEPGLREAGFWRFVADPYDPSESQAI--ELLLAHSAGYVELFYGRPRTQSSWELVTDALARSR---SGVLVGGAKRLYGIVEGGD---------------------LAYVEERVDADGG--------LVP------HLSARLSRFVG------------- |
| 4QPP Chain:A ((48-376)) | YYECYSDVSVHEEMIADRVRTDAYRLGILRNWAALRGKTVLDVGAG---TGILSIFCAQAGARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPA---SAELFIVPISD--QMLEWRLGFWSQVKQHYGVDMSCLEGFATRCLMG-HSEIVVQGLSGEDVLARPQRFAQLELSRAGLEQELEAGVGGRFRCSCYGSAPMHGFAIWFQVTFPGGESEKPLVLSTSPFHPATHWKQALLYLNEPVQVEQDTDVSGEITLLPSRDNPRRLRVLLRYKVGDQEEKTKDFAMED |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QPP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30707 for 1427 contacts (-21.5/contact) +
2D Compatibility (PS) -23011 + (NN) -4023 + (LL) -600
1D Compatibility (HY) -5600 + (ID) 2900
Total energy: -66841.0 ( -46.84 by residue)
QMean score : 0.114
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