Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIGIGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLRKKGEVEQPGDTQVVLLTEIRDLLAQTNGDSPGRHGGRGTPSPTDGPRASTESQ
3HZQ Chain:A ((1-94))
MLKEFKEFALKGNVLDLAIAVVMGAAFNKIICSLVENIIMPLIGKI------FGSVDFAKEWSFWGIKYGLFIQSVIDFIIIAFALFIFVKIANTLMKKE---------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3HZQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49868 for 453 contacts (-110.1/contact) +
2D Compatibility (PS) -9692 + (NN) -2664 + (LL) 1028
1D Compatibility (HY) -12800 + (ID) 1650
Total energy: -75646.0 ( -166.99 by residue)
QMean score : 0.108
(partial model without unconserved sides chains):
PDB file :
Tito_3HZQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HZQ-query.scw
PDB file :
Tito_Scwrl_3HZQ.pdb
: