Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MARQRFRDQVVLITGASSGIGEATAKAFAREGAVVALAARREGALRRVAREIEAAGGRAMVAPLDVSSSESVRAMVADVVGEFGRIDVVFNNAGVSLVGPVDAETFLDDTREMLEIDYLGTVRVVREVLPIMKQQRSGRIMNMSSVVGRKAFARFAGYSSAMHAIAGFSDALRQELRGSGIAVSVIHPALTQTPLLANVDPADMPPPFRSLTPIPVHWVAAAVLDGVARRRARVVVPFQPRLLMVGDAFSPRYGDRVVRLLESKIFGRLIGSYRGSVYRHQPTESAKAQAAQPERGYSSAR |
| 4NBU Chain:C ((10-213)) | ----RLQDKVAIITGAANGIGLEAARVFMKEGAKVVIADFNEAAGKEA---VEANPGVVFI-RVDVSDRESVHRLVENVAERFGKIDILINNAGITRDSMLSKMT-VDQFQQVINVNLTGVFHCTQAVLPYMAEQGKGKIINTSSVTGTYGNVGQTNYAAAKAGVIGMTKTWAKELARKGINVNAVAPGFTETAMVAEV-PEKVIEKMKAQVPM--------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4NBU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -136993 for 1692 contacts (-81.0/contact) +
2D Compatibility (PS) -21817 + (NN) -4835 + (LL) 7300
1D Compatibility (HY) -14800 + (ID) 3400
Total energy: -174545.0 ( -103.16 by residue)
QMean score : 0.637
|
|
|