Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAGSATVEKRLDFGLLGPLQMTI-------DGTPVPSGTPKQRAVLAMLVINRNRPVGVDALITALWEEWPPSGARASIHSYVSNLRKLLGGAGIDPRVVLAAAPPGYRLSIPDNTCDLGRFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGPTLRALNERILRQQPLDAKKSAKTTAAGTVTVLDQRTMASGQQAVAYLHDIASGRGYPLQAAATRIGRLHDNDIVLDSANVSRHHAVIVDTGTNYVINDLRSSNGVHVQHERIRSAVTLNDGDHIRICDHEFTFQISAGTHGGT |
2ZXJ Chain:A ((133-232)) | -----------NEITIKDIVIYPDAYSIKKRGEDIEL-THREFELFHYLSKHMGQVMTREHLLQTVWGYDYF-GDVRTVDVTIRRLREKIEDDPSHPEYIVTRRGVGYFLQQH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2ZXJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -69608 for 608 contacts (-114.5/contact) +
2D Compatibility (PS) -9918 + (NN) -3269 + (LL) 20280
1D Compatibility (HY) -4400 + (ID) 600
Total energy: -67515.0 ( -111.04 by residue)
QMean score : 0.561
|
|
|