Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTEPTVARPDIDPVLKMLLDTFPVTFTAADGVEVARARLRQLK--TPPELLPELRIEERTV-GYDGLTDIPVRVYWPPVVRDNLPVVVYYHGGGWSLGGLDTHDPVARAHAVGAQAIVVSVDYRLAPEHPYPAGIDDSWAALRWVGENAAELGGDPSRIAVAGDSAGGNISAVMAQLARDVGGPPLVFQLLWYPTTMADLSLPSFTENADAPILDRDVIDAFLAWYVPGLDISDHTMLPTTLAPGNADLSGLPPAFIGTAEHDPLRDDGACYAELLTAAGVSVELSNEPTMVHGYVNFALVVPAAAEATGRGLAALKRALHA |
| 3AIK Chain:D ((41-322)) | -----------------------------ASVEEIRSLFKQFSSLTPREEVG--KIEDITIPGSE--TNIKARVYYPKT-QGPYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYRLAPENKFPAAVVDSFDALKWVYNNSEKFNGKYG-IAVGGDSAGGNLAAVTAILSKK-ENIKLKYQVLIYPAVSFDLITKSLYDNGEGFFLTREHIDWFGQQYLR----SFADLLDFRFSPILADLNDLPPALIITAEHDPLRDQGEAYANKLLQSGVQVTSVRFNNVIHGFVSFFPFIEQGRDAIGLIGYVLRKVFYG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AIK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154662 for 2537 contacts (-61.0/contact) +
2D Compatibility (PS) -30784 + (NN) -17809 + (LL) 3060
1D Compatibility (HY) -21200 + (ID) 5700
Total energy: -227095.0 ( -89.51 by residue)
QMean score : 0.553
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