Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKV---AVTHRGSGAPKGLFG-----VECDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGMGMGH |
3RRO Chain:B ((16-250)) | ------------------LVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVNGGMYM-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3RRO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -120182 for 1848 contacts (-65.0/contact) +
2D Compatibility (PS) -24569 + (NN) -2648 + (LL) 944
1D Compatibility (HY) -20000 + (ID) 5200
Total energy: -171655.0 ( -92.89 by residue)
QMean score : 0.500
|
|
|