Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGLLSRLRKREPISIYDKIGGHEAIEVVVEDFYVRVLADDQLSAFFSGTNMSRLKGKQVEFFAAALGGPEPYTGAPMKQVHQGRGITMHHFSLVAGHLADALTAAGVPSETITEILGVIAPLAVDVTSGESTTAPV
3AQ5 Chain:B ((5-118))
------------QTIYEKLGGENAMKAAVPLFYKKVLADERVKHFFKNTDMDHQTKQQTDFLTMLLGGPNHYKGKNMTEAHKGMNLQNLHFDAIIENLAATLKELGVTDAVINEAAKVIEHTRKDM----------
General information:
TITO was launched using:
RESULT:
Template:
3AQ5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93950 for 787 contacts (-119.4/contact) +
2D Compatibility (PS) -12276 + (NN) -5437 + (LL) 1092
1D Compatibility (HY) -6000 + (ID) 2000
Total energy: -118571.0 ( -150.66 by residue)
QMean score : 0.538
(partial model without unconserved sides chains):
PDB file :
Tito_3AQ5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3AQ5-query.scw
PDB file :
Tito_Scwrl_3AQ5.pdb
: