Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKPVQTGTARG---DDDLAEVGRLAG----V--TQLAGLARYPQPMAPAAAAEHAGM-ALPARDQIVRLIADLDRPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALVVVTADLGTLNHTKLTLEALAAQQVSCAGLVIGSWPDPP-GLVAASNRSALA-RIA-MVRAALPAGAASLDAGDFAAMSAAAFDRNWVAGLVG
3QXC Chain:A ((21-236))
GHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLKPIETGVNDAINHSSDAHLFLQDNRLLDRSLTLKDISFYRYHKVSAPLIAQQEEDPNAPIDTDNLTQRLHNFTKTYDLVIVEGAGGLCVPITLE-ENMLDFALKLKAKMLLISHDNLGLINDCLLNDFLLKSHQLDYKIAINLKGNNTAFHSISLPYIELFNTRSNNPIVIFQQSLKVLMS----------------------
General information:
TITO was launched using:
RESULT:
Template:
3QXC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -146536 for 1645 contacts (-89.1/contact) +
2D Compatibility (PS) -22472 + (NN) -12638 + (LL) 1348
1D Compatibility (HY) -6800 + (ID) 2050
Total energy: -189148.0 ( -114.98 by residue)
QMean score : 0.343
(partial model without unconserved sides chains):
PDB file :
Tito_3QXC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QXC-query.scw
PDB file :
Tito_Scwrl_3QXC.pdb
: