Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQNRQVANATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTEAAVLGGHDAVFLALPHGHSAVLAQQL-SPETLIIDCGADFRLTDAAVWERFYGSSHA-----GSWPYGLPELPGARDQLRGTRRIAVPGCYPTAALLALFPALAA-DL--IEPAVTVVAVSGTSGAGRAATTDLLGAEVIGSARAYNIAGVHRHTPEIAQGLRAVTDRDVSVSFTPVLIPASRGILATCTARTRS--PLSQLRAAYEKAYHAEPFIYLMPE----GQLPRTGAVIGSNAAHIAVAVDEDAQTFVAIAAIDNLVKGTAGAAVQSMNLALGWPETDGLSVVGVAP |
| 5EIN Chain:A ((1-344)) | ------MDKKTLSIVGASGYAGGEFLRLALSHPYL-----EVKQVTSRRFAGEPVHFVHPNLRGR-TNLK-FIPPEKLEPADILVLALPHGVFAREFDRYSALAPILIDLSADFRLKDPELYRRYYG-EHPRPDLLGCFVYAVPEL--YREALKGADWIAGAGANATATLLGLYPLLKAGVLKPT--PIFVTLLISTSAAGAEASPASHHPERAGSIRVYKPT-GHRHTAEVVENLPG----RPEVHLTAIATDRVRGILMTAQCFVQDGWSERDVWQAYREAYAGEPFIRLVKQKKGVHRYPDPRFVQGTNYADIGFELEEDTGRLVVMTAIDNLVKGTAGHALQALNVRMGWPETLGLDFPGLHP |
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General information:
TITO was launched using:
| RESULT:
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Template: 5EIN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -230665 for 2890 contacts (-79.8/contact) +
2D Compatibility (PS) -36324 + (NN) -15061 + (LL) 800
1D Compatibility (HY) -21200 + (ID) 6350
Total energy: -308800.0 ( -106.85 by residue)
QMean score : 0.473
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