Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRELVTTAAITGAAIGGAPVAGADPQRYDGDVPGMNYDASLGAPCSSWERFIFGRGPSGQAEACHFPPPN-----QFPPAETGYWVISYPLYGVQQV--GAPCPKPQAAAQSPDGLPMLC----LGARGWQPGWFTGAGFFPPEP
2JVE Chain:A ((18-88))
------------------------------------------------------------MALKCFTRNGDDRTVTTCAEEQTRCLFVQLPYSEIQECKTVQQCAEVLEEVTAI-GYPAKCCCEDLCNRSEQ--------------
General information:
TITO was launched using:
RESULT:
Template:
2JVE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20776 for 359 contacts (-57.9/contact) +
2D Compatibility (PS) -6605 + (NN) -1181 + (LL) 1784
1D Compatibility (HY) -3600 + (ID) 600
Total energy: -30978.0 ( -86.29 by residue)
QMean score : 0.197
(partial model without unconserved sides chains):
PDB file :
Tito_2JVE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JVE-query.scw
PDB file :
Tito_Scwrl_2JVE.pdb
: