Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATTLPVQRHPRSLFPEFSELFAAFPSFAGLRPTFDTRLMRLEDEMKEGRYEVRAELPGVDPDKDVDIMVRDGQLTIKAERTEQKDFDG----RSEFAYGSFVRTVSLPVGADEDDIKATYDKGILTVSVAVSEGKPTEKHIQIRSTN
3GLA Chain:A ((2-97))
------------------------------------QWVPRVDIKEEVNHFVLYADLPGID-PSQIEVQMDKGILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADGITAAGRNGVLEIRIPKR---------------
General information:
TITO was launched using:
RESULT:
Template:
3GLA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39678 for 615 contacts (-64.5/contact) +
2D Compatibility (PS) -10206 + (NN) -4675 + (LL) 2820
1D Compatibility (HY) -4400 + (ID) 1350
Total energy: -57489.0 ( -93.48 by residue)
QMean score : 0.549
(partial model without unconserved sides chains):
PDB file :
Tito_3GLA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GLA-query.scw
PDB file :
Tito_Scwrl_3GLA.pdb
: