Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTATASDDEAVTALALSAAKGNGRALEAFIKATQQDVWRFVAYLS-DVGSADDLTQETFLRAIGAIPRFSARSSARTWLLAIARHVVADHIRHVRSRPRTTRGARPEHLIDGDRHARGFEDLVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDALLADAEPDDLTG
3N0R Chain:A ((20-160))
----------------------EMHLLARLAPHLPYIRRYARALTGDQATGDHYVRVALEALAAGELVLDANLSPRVALYRVFHAIWLSSGA----GHDQG-----------------LHAGDDAAQRLMRIAPRSRQAFLLTALEGFTPTEAAQILDCDFGEVERLIGDAQAEIDAELA------
General information:
TITO was launched using:
RESULT:
Template:
3N0R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68909 for 1005 contacts (-68.6/contact) +
2D Compatibility (PS) -14652 + (NN) -5342 + (LL) 2148
1D Compatibility (HY) -4400 + (ID) 1150
Total energy: -92305.0 ( -91.85 by residue)
QMean score : 0.478
(partial model without unconserved sides chains):
PDB file :
Tito_3N0R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3N0R-query.scw
PDB file :
Tito_Scwrl_3N0R.pdb
: