Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAMVNTTTRLSDDALAFLSERHLAMLTTLRADNSPHVVAVGFTFDPKTHIARVITTGGSQKAVNADRSGLAVLSQVDG-ARWLSLEGRAAVNSDIDAVRDAELRY--AQRYRTPRPNPRRVVIEVQIERVLGSADLLDRA
2IG6 Chain:A ((12-142))
--HENLYFQGMKRALEFLKECGVFYLATNE-GDQPRVRPFGAVFEYE-GKLYIVSNNTKKCFKQMIQNPKVEISGMNKKGQWIRLTGEVANDDRREVKELALEAVPSLKNMYS-VDDGIFAVLYFTKGEGTICSFK----
General information:
TITO was launched using:
RESULT:
Template:
2IG6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30952 for 914 contacts (-33.9/contact) +
2D Compatibility (PS) -14221 + (NN) -6482 + (LL) 752
1D Compatibility (HY) -800 + (ID) 950
Total energy: -52653.0 ( -57.61 by residue)
QMean score : 0.421
(partial model without unconserved sides chains):
PDB file :
Tito_2IG6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IG6-query.scw
PDB file :
Tito_Scwrl_2IG6.pdb
: