Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTSGSLQFTVLRAVNPATDAQRESMLREPGFGKYHTDHMVSIDYAEGRGWHNARVIPYGPIELDPSAIVLHYAQEVFEGLKAYRWADGSIVSFRADANAARLRSSARRLAIPELPDAVFIESLRQLIAVDKAWVPGAGGEEALYLRPFIFATEPGLGVRPATQYRYLLIASPAGAYFKGGIAPVSVWVSTEYVRACPGGTGAAKFGGNYAASLLAQAEAAENGCDQVVWLDAVERRYIEEMGGMNIFFVLGSGGSARLVTPELSGSLLPGITRDSLLQLAID-AGFAVEERRIDIDEWQKKAAAGEITEVFACGTAAVITPVARVRHGASEFRI--ADGQPGEVTMALRDTLTGIQRGTFADTHGWMARLG |
3UYY Chain:B ((30-358)) | -----------------------------GFSYIRTDLRYLAHWKDGE-WDAGTLTEDNQIHLAEGSTALHYGQQCFEGLKAYRCADGSINLFRPDQNAARMRMSCRRLLMPELSDEQFIDACLQVVRANEHFLPPYGTGGSLYLRPFVIGVGDNIGVRTAPEFIFSVFCVPVGPYFKGGLTPTN-FITSDYDRAAPHGTGAAKVGGNYAASLLPGYEAKKRDFADVIYLDPATHTTIEEAGAANFFAITQDG--QKFVTPQ-SPSILPSITKYSLLWLAEHRLGLEVEEGDIRIDELGKFSEAG------ACGTAAVITPIGGIQHG-DDFHVFYSESEPGPVTRRLYDELVGIQYGDKEAPEGWIVKV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UYY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187060 for 2712 contacts (-69.0/contact) +
2D Compatibility (PS) -35607 + (NN) -13717 + (LL) 2860
1D Compatibility (HY) -25600 + (ID) 7300
Total energy: -266424.0 ( -98.24 by residue)
QMean score : 0.413
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