Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDPLHVTFVCTGNICRSPMAEKMFAQQLRHRGLGDAV-RVTSAGTGNWHVGSCADERAAGVLRAHGYPTDHRAAQVGTEHL-AADLLVALDRNHARLLRQLGVEA--ARVRMLRSFDPRSGTHALDVEDPYYGDHSDFEEVFAVIESALPGLHDWVDERLARNGPS
1D1Q Chain:B ((8-149))
----ISVAFIALGNFCRSPMAEAIFKHEVEKANLENRFNKIDSFGTSNYHVGESPDHRTVSICKQHGVKINHKGKQIKTKHFDEYDYIIGMDESNINNLKKIQPEGSKAKVCLFGDWNTNDGTVQTIIEDPWYGDIQDFEYNFKQI---------------------
General information:
TITO was launched using:
RESULT:
Template:
1D1Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89824 for 1102 contacts (-81.5/contact) +
2D Compatibility (PS) -15174 + (NN) -8459 + (LL) 668
1D Compatibility (HY) -11600 + (ID) 2350
Total energy: -126739.0 ( -115.01 by residue)
QMean score : 0.442
(partial model without unconserved sides chains):
PDB file :
Tito_1D1Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1D1Q-query.scw
PDB file :
Tito_Scwrl_1D1Q.pdb
: