Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSYVAAEPGVLISPTDDLQSPRSAPAAHDENADGITGGTRDDSAPNSRFQLGRRIPEATAQEGFLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVHVAESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSEFQSNEAYRELHADLLTRLKDDEDLRAVCQDLVRRFLSTKVG----PRQGATATQEQVCMDYICAEAPLFLDTPAILGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQGHAIVTPDGSPAE |
5AHU Chain:A ((1-63)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------MPMQMFMQVYDEIQMFLLEELELKFDMDPNRVRYLRKMMDTTCLGGKYNRGLTVIDVAESLLS------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5AHU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4740 for 282 contacts (-16.8/contact) +
2D Compatibility (PS) -6413 + (NN) -3949 + (LL) 12376
1D Compatibility (HY) -4000 + (ID) 500
Total energy: -7226.0 ( -25.62 by residue)
QMean score : 0.564
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