Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIEPQHAVNIVLKEAARSGRADETMVLVTEKVEATLRWAGNSMTTNGVSHSRNVTVISIVRRGDSAFVGSVVSAEVDPSVLPGLVVSSQ--DAARSAPEAGDAAPLLADTGEPDDWDAPVPGTGAGVFTGIA--GSLSRGFRGADRLYGYAHRSVSTTFLASSTGLRRRYTQPTGAIEINAKRGDASAWVGIGTPDFVEVPIDLMLERLSTRLRWAQRTVELPAGRYQTIMPPSTVADMMIYLGWSMAGRGAQEGRTAFSAPGGG-------------TRVGERLTELPLTLFTDPAAPGLACTPFVAVSNSSETQSVFDNGMEISQV---DWIRSGVINALAYPRATAAKFDAPVAVAADNLI---MTGGSADLADMIAGTERGLLLTTLWYIREVDPTTLLLTGLTRDGVYLVEDGEVSAAVNNFRF-NESPLDLLRRATEAGVSEP-------TLPREWSDWVTRTAMPPLRIPDFHMSSVSQAQ--------- |
| 4G26 Chain:A ((24-499)) | --SPEALLKQKLDMCSKKGDVLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGI--QPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAALLKVSMDTKNADKVYKTLQRLRDLVRQ------------VSKSTFDMIEEWFKSEVATKTGVKKWDVKKIRDAVVSGGGGWHGQGWLGTGKWNVKRTEMDENGVCKCCKEKLVCIDINPVETETFAASLTRLACEREVKANFNQFQEWLERHGPFDAVIDGANMGLVNQRSFSFFQLNNTVQRCQQISPSKRLPLVILHKSRVNGGPATYPKNRALLEKWKNAGALYATP---PGSNDDWYWLYAAVSCKCLLVTNDEMRD--HLFQLLGNSFFPRWKEKHQVRISVTREDGLKLNMPPPYSIVIQESEDGTWHVPMSVEDDLQTSRQWLCAKRSK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G26.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36605 for 3309 contacts (-11.1/contact) +
2D Compatibility (PS) -45073 + (NN) 968 + (LL) 1944
1D Compatibility (HY) -3200 + (ID) 2200
Total energy: -84166.0 ( -25.44 by residue)
QMean score : 0.109
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