Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSLTLSEASCIASASRWRHIIPAGVVCALIAGIGVGCHGGPSDVVGRAGPDRAHTSITLVAYAV--PEPGWSAVIPAFNASEQGRGVQVITSYGASADQSRGVA---DGKPADLVNFSVEPDIARLVKAGKVDK--DW-----DAD-A-------TKGIPFG-SVVTFVVRAGNPK-NIRDWDDLLRPGI--EVIT----PSPLSSGSAKWNLLAPYAAKSDGG--RNNQAGIDFVNTLVNEHVKLRPGSGREATDVFVQGSGDVLISYENEAIATER-AGKPVQHVTPP-QTFKIENPLAVVATSTHLGAATAFRNFQYTVQAQKLWAQ-AGFRPVDPAVAADFADLFPVPAKLWTIADLGGWGSVDPQLFDKATGSITKIYLRATG |
| 3PU5 Chain:A ((4-285)) | -----------------------------------------------------ADDHIYVTSSGGSFLENVRKHMAEPFEKQS-GVKVTLVPG--TNPAHALKILSSRGTPPYDVAAFGG-NDMYRLIRAKKLAQVDEKSVPSLADVPEKFKADWEGCGSLYDYSSVGIAYRPDKIQGGVKSWKEFVERTVAGEFGKQVFFNNLSSNVRG-AEVLSMFGKI-YGSGYGDIEASIATLERM-KPHIFKFFTAFNDPVVLLTSGEGAIGPGWDGRTFIAEDSTKGMVKWVDPTEGAVSSGPVMAVVKGGK-EDLAKAFMNYALGEEAQKAFCEAMYYGAVNRKVQ---------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PU5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56647 for 1933 contacts (-29.3/contact) +
2D Compatibility (PS) -27237 + (NN) -11011 + (LL) 5612
1D Compatibility (HY) -10400 + (ID) 2200
Total energy: -101883.0 ( -52.71 by residue)
QMean score : 0.356
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