Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYARKYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIKTFS
3ZBH Chain:A ((9-97))
-----LTPEELRGVARQYNVESSNVTELIARLDQMSHTL-Q---GIWEGASSEAFIQQYQELRPSFEKMAVLLNEVGQQLHNSATILEDTDQQIASQI-
General information:
TITO was launched using:
RESULT:
Template:
3ZBH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7869 for 493 contacts (-16.0/contact) +
2D Compatibility (PS) -9845 + (NN) -3167 + (LL) 928
1D Compatibility (HY) -4800 + (ID) 650
Total energy: -25403.0 ( -51.53 by residue)
QMean score : 0.437
(partial model without unconserved sides chains):
PDB file :
Tito_3ZBH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZBH-query.scw
PDB file :
Tito_Scwrl_3ZBH.pdb
: