Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDQHQRPDPMGPGSPRASARRPEPDPMGEPWWSRAVFYQVYPRSFADSNGDGVGDLDGLASRLDHLQQLGVDAIWINPVTVSPMADHGYDVADPRDIDPLFGGMPAFERLVAAAHRQGIKVTMDVVPNHTSSAHPWFQAALADLPGSPARDRYFFRDGRGPDGSLPPNNWESVFGGPAWTRVREPDGNPGQWYLHLFDTEQPDLNWDNPEILDDFEKTLRFWLDRGVDGFRIDVAHGMAKPPGLPDSPDLGIEVLHHRDDDPRFNHPNVHAIHRDIRTVIDEYPGAVTVGEVWVHDNARWAEYL--RPDELHLGFNFRLARTE----------FDAAEIRDAVANSLAAAALQNATPTWTLANHDVGREVSRYGGGEIGLRR--AKAMAVVMLALPGVVFLYNGQELGLPDVDLPDEVLQD----------PTWERSGRTE----------RGRDGCRVPIPWSGNIPPFGFSTCPDTWLPMPPEWAALTAEKQRADAGSTLSFFRLALRLRRERNEFDG----DVDWLAAPDDALIFRRHGGG----LVCALNAAERPLALPAGEPILASAPLTDATLPPNAAAWLV |
4GO8 Chain:B ((3-524)) | ---------------------------GAPWWKSAVFYQVYPRSFKDTNGDGIGDFKGLTEKLDYLKGLGIDAIWINPHYASPNTDNGYDISDYREVMKEYGTMEDFDRLMAELKKRGMRLMVDVVINHSSDQHEWFKSSRAS-KDNPYRDYYFWRDGK--DGH-EPNNYPSFFGGSAW----EKDPVTGQYYLHYFGRQQPDLNWDTPKLREELYAMLRFWLDKGVSGMRFDTVATYSKTPGF---PDLTPEQMKNF-AEAYTQGPNLHRYLQEMHEKVFDHYDAVTAGEIFGVPLNQVPLFIDSRRKELDMAFTFDLIRYDRALDRWHTIPRTLADFRQTI-DKVDAIAGEYGWNTFFLGNHDNPRAVSHFGDDRPQWREASAKALATVTLTQRGTPFIFQGDELGM--TNYPFKTLQDFDDIEVKGFFQDYVETGKATAEELLTNVALTSRDNARTPFQWDDSANA-GFTTGK-PWLKVNPNYTEINAAREIGDPKSVYSFYRNLISIRHETPALSTGSYRDID--PSNADVYAYTRSQDGETYLVVVNFKAEPRSFTLPDGMHI-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GO8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152209 for 4043 contacts (-37.6/contact) +
2D Compatibility (PS) -53278 + (NN) -47241 + (LL) 1988
1D Compatibility (HY) -34800 + (ID) 9550
Total energy: -295090.0 ( -72.99 by residue)
QMean score : 0.553
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