Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLRWITAGESHGRALVAVVEGMVAGVHVTSADIADQLARRRLGYGRGARMTFERDAVTVLSGIRHGSTLGGPIAIEIGNTEW-PKWETVMAADPVDPAELADVARNAPLTRPRPGHADYAGMLKYGFDDARPVLERASARETAARVAAGTVARAFLRQALGVEVLSHVISIGASAPYEGPPPRAEDLPAIDASPVRAYDKAAEADMIAQIEAAKKDGDTLGGVVEAVALGLPVGLGSFTSGDHRLDSQLAAAVMGIQAIKGVEIGDGFQTARRRGSRAHDEMYPGPDGVVRSTNRAGGLEGGMTNGQPLRVRAAMKPISTVPRALATVDLATGDEAVAIHQRSDVCAVPAAGVVVETMVALVLARAALEKFGGDSLAETQRNIAAYQRSVADREAPAARVSG |
4OB9 Chain:A ((9-354)) | LFRVTTCGESHGVGLMAIVDGVPPGLALTEEDLQKDLDRRKPGTSKFATQRKEPDQVEIISGVFEGKTTGTPIGLLIRNTDQK------------------------------------------------GG-GRSSARETAMRVAAGAIAKKYLAEKFGVLIRGHVTQIGNEVAEKL------DWNEVPNNPFFCGDVDAVPRFEALVTSLREQGTSCGAKLEILAEKVPVGWG--EPVFDRLDADIAHAMMSINAVKGVEIGDGFAVAGQFGHETRDELTSH----GFLANHAGGILGGISSGQTIRVAIALKPTA--------------------KGRHDPCVGVRATPIAEAMLAIVLMDHFLRHRAQNADV------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4OB9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -174520 for 2349 contacts (-74.3/contact) +
2D Compatibility (PS) -32014 + (NN) -16194 + (LL) 5960
1D Compatibility (HY) -14800 + (ID) 5450
Total energy: -237018.0 ( -100.90 by residue)
QMean score : 0.440
|
|
|