Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MTLIAARRY-SATMHGSASEACGSVDHLVDRHPTVSPVRLIAQLRP----PPTFAEVSFATYRPDPV--EPTQAAAVVACQDFCRQAVERRAGRKKWFGKRDV-LPGVGLYLDGGFGVGKTHLL-ASAYYQLPGTGPDAPTCPKAFATFGELTQLAGVFGFADCIDLLANYTALCIDEFELDDPGNTTLISRLLSALVERGVSVAA---------------TSNTL-PEQLGEGRFAAQDFLREINTLASIFT-TVRIEGPDYRHRDLPPAPAPLSDEEVAARAARVEGATLDDFDALCAHLATMH-PSRYLTLIEGVTAVFL--TGVHGIDDQNV----ALRLVALVDR--LYDAGIPVVA-----SGAKLDTIFSEEMLAGGYRKKYLRAT----SRLLALTAG----VIQAREP-- |
| 4RUW Chain:A ((53-438)) | RRDL----RVMTWNIHTAVAP---------DAPGVVDEPRIAAVIRAEAPDVVVLNEVHRDAPGPGSHGDQPARLAELLAADGY----------VHTWFGLTEVDLPHEGAVLPGS---SNGNVVMSRHPFVGGGVVVPLPNENYEPGGKLRRSLLTVTVDVPGLGDVVVHATHLSTPGSAVLVEDQKEQLRIVLDHVDARVPSVLAGDLNIWTTDVPTQPYSQNNLMQSWIAEDHL--ADTWRQVNDPGAGPTMTASYGRPE------SPHPDRRIDYVFATPAFDVVAGHVSLVDRFASDHLGVVMDLRLGGAPVAARTVLAGEDGLDGWAQLTASRPGRLRLSVCKNRGQADDDGTAVRAVLRNRAGVALRTVTDSGTSRDRCTVETWRGALPPGARLEACLVGADGTILASRTETL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RUW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85199 for 2736 contacts (-31.1/contact) +
2D Compatibility (PS) -33799 + (NN) 10768 + (LL) 2884
1D Compatibility (HY) -5200 + (ID) 3550
Total energy: -114096.0 ( -41.70 by residue)
QMean score : 0.171
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