Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVVAVTIFVAAYVLIASDRVNKTMVALTGAAAVVVLPVITSHDIFYSHDTGIDWDVIFLLVGMMIIVGVLRQTGVFEYTAIWAAKRARGSPLRIMILLVLVSALASALLDNVTTVLLIAPVTLLVCDRLNINTTSFLMAEVFASNIGGAATLVGDPPNIIVASRAGLTFNDFMLHLTPLVVI-----VLIALIAVLPRLFGSITVEADRIA-DVMALDEGEAIRDRGLLVKCGAVLVLVFAAFVAHPVLHIQPS-LVALLGAGMLIVVSG--------LTRSEYLSSVEWD--TLLFFAG---LFIMVGALVKTGV-----VNDLARAATQLTGGNIVATAFLILGVSAPISGI------IDNIPYVATMTPLVAELVAVMGGQPSTDTPWWALALGADFGGNLTAIGASANVVMLGIARRAGAPISFWEFTRKGAVVTAVSIALAAIYLWLRYFVLLH |
| 1TL2 Chain:A ((2-236)) | ---------------------------------------------------------------------------------------------------------------------------------------------------GGESMLRGVYQDKFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGVL---NDKIYKGTPPTHDNDNWMGRAKKIGNGG--------WNQFQFLFFDPNGYLYAVSKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVHGQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQGGKFYEDYPPSYAYDNWLARAKLIGNGGWDDFRFLFF------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TL2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -171383 for 1435 contacts (-119.4/contact) +
2D Compatibility (PS) -21215 + (NN) 1464 + (LL) 22828
1D Compatibility (HY) -5600 + (ID) 1900
Total energy: -175806.0 ( -122.51 by residue)
QMean score : 0.043
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