Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNIDMAALHAIEVDRGISVNELLETIKSALLTAYRHTQGHQTDARIEIDRKTGVVRVIARETDEAGNLISEWDDTPEGFGRIAATTARQVMLQRFRDAENERTYGEFSTREGEIVAGVIQRDSRANARGLVVVRIGTETKASEGVIPAAEQVPG-------ESYEHGNRLRCYVVGVTRGAREPLITLSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVRSNVAGLNAKGACIGPMGQRVRNVMSELSGEKIDIIDYDDDPARFVANALSPAKVVSVSVIDQTARAARVVVPDFQLSLAIGKEGQNARLAARLTGWRIDIRGDAPPPPPGQPEPGVSRGMAHDR |
| 2KHI Chain:A ((275-347)) | -------------------------------------------------------------------------------------------------------------PEGTKLTGRVTNLTD----YGCFVEIEE---GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEER--RRISLGLK------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KHI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30706 for 428 contacts (-71.7/contact) +
2D Compatibility (PS) -7371 + (NN) -4766 + (LL) 18720
1D Compatibility (HY) -4800 + (ID) 600
Total energy: -29523.0 ( -68.98 by residue)
QMean score : 0.493
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