Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNEALIGLAFAAGLVAALNP----------CGFAMLPAYLLLVVYGQDSAGRTGPLSAVGRAAAATVGMALGFLTVFGIFGALTISAATAVQRYLPYATVLIGLALIALGGWLLLGRGLTALTPRSLGVRWAPTVRLGSMYGYGISYAVASLSCTIGPFLAVTGAGLRGGSVVGSVAIYLAYVAGLTLVVGVLAVAAATASSALADRLRRILPFVNRISGALLVVVGLYVGYYGLYELRLIAGVGANPQDAVIAAAGRLQGALAGWVNQHGAWPWAVLLVVLVVGAFAGTWFRRVRR |
| 3RLB Chain:A ((17-192)) | NVRLLTEIAFMAALAFIISLIPNTVYGWIIVEIACIPILLLSLRRG--------------LTAGLVGGLIWGILSMI----TGHAYILSLSQAFLEYL---VAPVSLGIAGLFRQKTAPLKLAPVLLGTFVAVLLKYFFHFIAGIIF-----------WSQYAWKGW--GAVAYSLAVNGISGILTAIAAFVILIIFVKKFPKLFIHSNY--------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RLB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164119 for 1319 contacts (-124.4/contact) +
2D Compatibility (PS) -16860 + (NN) 1241 + (LL) 8388
1D Compatibility (HY) -7200 + (ID) 1600
Total energy: -180150.0 ( -136.58 by residue)
QMean score : 0.340
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