Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRARPLTLLTALAAVTLVVVAGCEARVEAEAYSAADRISSRPQARPQPQPVELLLRAITPPRAPAASPNVGFGELPTRVRQATDEAAAMGATLSVAVLDRATGQLVSNGNTQIIATASVAKLFIADDLLLAEAEGKVTLSPE------------------------DHHALDVMLQSSDDGAAERFWSQDGGNAVVTQVARRYGLRSTAPPS-D-------GRWWNTISSAPDLIRYYDMLLDGSGGLPLDRAAVIIADLAQSTPTGIDGYPQRFGIPDGLY-AEPVAVKQGWM-CCIGSSWMHLSTGVI-GP-ERRYIMVIESLQPADDATARATITQAVRTMFPNGRI |
| 3W4P Chain:A ((5-244)) | ------------------------------------------------------------------------AAAERQLRELEST---FDGRLGFVALDTATGARIAHRGDERFPFCSTSKMMLCAAVLARSAGEPALLQRRIAYAKGDLIRYSPITEQHVGAGMSVAELCAATLQYSDNTAANLLIALLGGPQTVTAYARSIGDATFRLDRREPELNTALPGDERDTTTPAAMAASVHRLLVGD-ALGAAQRAQLNAWMLGN------KTG-DARIRAGVPADWRVADKTGTGDYG-----TANDIGVAYPPNRAPIVFIVYTTMRN---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W4P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92279 for 1662 contacts (-55.5/contact) +
2D Compatibility (PS) -22931 + (NN) -13421 + (LL) 7752
1D Compatibility (HY) -2400 + (ID) 2000
Total energy: -125279.0 ( -75.38 by residue)
QMean score : 0.511
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